Best Clearinghouse Software for Medical Billing: Integrated vs Standalone Solutions
Integrated vs standalone clearinghouse software for medical billing. Compare speed, cost, and flexibility to choose the best solution for your practice.
Integrated clearinghouses (like ENTER's) reduce manual work and speed up claims submission. Standalone clearinghouses offer flexibility but require more setup. Choose integrated if you want simplicity; choose standalone if you need maximum control.
What Is a Clearinghouse?
A clearinghouse is a middleman between your practice and insurance payers. It receives claims from your billing system, validates them, and routes them to the correct payer in the right format.
They validate claims before submission, reducing rejections
They handle payer-specific formatting requirements
They provide claim status tracking and delivery confirmation
Without a clearinghouse, you'd have to submit claims directly to each payer in their unique format, a time-consuming nightmare. Clearinghouses reduce claim rejection rates by up to 30% by catching errors before submission and ensuring compliance with payer requirements.
Integrated Clearinghouses: How They Work
An integrated clearinghouse is built into your RCM platform. Your billing software connects directly to the clearinghouse without a separate integration step.
How it works:
Your EHR generates a claim
Your RCM platform (e.g., ENTER) validates the claim
The integrated clearinghouse receives the claim automatically
The clearinghouse submits to the payer
Status updates flow back to your RCM platform
Advantages:
One-click submission: No manual uploads or file transfers
Real-time validation: Errors caught before submission
Unified dashboard: Track claims and clearinghouse status in one place
Better data flow: Your RCM platform has full visibility into claim status
Disadvantages:
Limited flexibility: You're locked into the platform's clearinghouse partners
Less control: You can't switch clearinghouses without changing platforms
Vendor dependency: If the platform has clearinghouse issues, your claims are affected
Best for: Practices wanting simplicity, speed, and minimal manual work.
Standalone Clearinghouses: How They Work
A standalone clearinghouse is a separate service you integrate with your RCM platform. You manage the connection and submit claims through their portal or API.
How it works:
Your RCM platform generates a claim file
You upload the file to the standalone clearinghouse (or use the API)
The clearinghouse validates and submits to payers
You check the clearinghouse portal for status updates
You manually import the status back into your RCM platform
Advantages:
Maximum flexibility: Switch clearinghouses anytime
Payer choice: Select which clearinghouses to use for which payers
Direct control: You manage the submission process
Competitive pricing: Shop around for the best rates
Disadvantages:
Manual steps: File uploads, status checks, manual imports
Fragmented visibility: Claims status lives in the clearinghouse, not your RCM platform
More setup: Requires integration and ongoing management
Slower workflow: Manual steps add delays
Best for: Practices with specific clearinghouse preferences or complex payer requirements.
Head-to-Head Comparison
ENTER's Integrated Clearinghouse
ENTER integrates all major clearinghouses (Emdeon, Availity, Trizetto, etc.) into its platform.
How it works:
Claims are validated by claimAI
Automatically routed to the right clearinghouse for each payer
Integrated clearinghouses win on speed and simplicity. Standalone clearinghouses win on flexibility and control. Most practices benefit from integration with fewer manual steps, faster claims, and better visibility. If you're using an RCM platform like ENTER, the integrated clearinghouse is already optimized for your workflow.
Jordan Kelley is the CEO of ENTER, where he leads the charge in AI-powered Revenue Cycle Management, helping healthcare providers streamline operations and maximize financial efficiency. A serial entrepreneur and innovator, Jordan previously founded the world’s first Bitcoin ATM, pioneering mainstream access to cryptocurrency with his company Robocoin. Now, he’s applying that same disruptive mindset to revolutionizing healthcare payments, making RCM smarter, faster, and more accessible.View Full Bio